BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C10LP1|AL427294
(1062 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig631 715 0.0
3x_Contig1717 361 1e-99
3x_Contig1521 353 3e-97
3x_Contig1722 337 2e-92
3x_Contig939 272 1e-72
3x_Contig1675 266 7e-71
3x_Contig1747 145 2e-34
3x_Contig1718 145 2e-34
3x_Contig1376 145 2e-34
3x_Contig1204 143 7e-34
3x_Contig1088 143 7e-34
3x_Contig727 143 7e-34
3x_Contig582 143 7e-34
>3x_Contig631
Length = 2339
Score = 715 bits (360), Expect = 0.0
Identities = 367/368 (99%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 1 atcttgtcagatctttattagaagaattcatcttgattagctatctatctcctagtagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 atcttgtcagatctttattagaagaattcatcttgattagctatctatctcctagtagaa 1307
Query: 61 ttagatgcacctggtgtctgtagatctgatccctactaattagtagattagatctgagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 ttagatgcacctggtgtctgtagatctgatccctactaattagtagattagatctgagta 1247
Query: 121 ctggtttatatactttgctatgtgtcagtgacacaaaactatcattaaccgcctattata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 ctggtttatatactttgctatgtgtcagtgacacaaaactatcattaaccgcctattata 1187
Query: 181 ttggtatcacccggtcatgcattatgactagttccaacgaaatcagtgttctgcaaccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 ttggtatcacccggtcatgcattatgactagttccaacgaaatcagtgttctgcaaccgt 1127
Query: 241 tgagcgaacctgtagtgcaaag-tttttctatttctcaagtacagatccgcgatagttta 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1126 tgagcgaacctgtagtgcaaagttttttctatttctcaagtacagatccgcgatagttta 1067
Query: 300 atggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccccgtcgcggagta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 atggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccccgtcgcggagta 1007
Query: 360 tatttttt 367
||||||||
Sbjct: 1006 tatttttt 999
>3x_Contig1717
Length = 18389
Score = 361 bits (182), Expect = 1e-99
Identities = 209/218 (95%)
Strand = Plus / Plus
Query: 1 atcttgtcagatctttattagaagaattcatcttgattagctatctatctcctagtagaa 60
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||
Sbjct: 1424 atcttgtcagatctttattagaagaatccatcttgattagctatatatctcctagtataa 1483
Query: 61 ttagatgcacctggtgtctgtagatctgatccctactaattagtagattagatctgagta 120
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1484 ttagatgcacctagtgtctttagatctgatccctactaattagtagattagatctaagta 1543
Query: 121 ctggtttatatactttgctatgtgtcagtgacacaaaactatcattaaccgcctattata 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 ctggtttatatactttgttatgtgtcagtgacacaaaactatcattaaccgcctattata 1603
Query: 181 ttggtatcacccggtcatgcattatgactagttccaac 218
||||||| |||| |||||||||||||||||||||||||
Sbjct: 1604 ttggtattaccctgtcatgcattatgactagttccaac 1641
>3x_Contig1521
Length = 8057
Score = 353 bits (178), Expect = 3e-97
Identities = 208/218 (95%)
Strand = Plus / Plus
Query: 1 atcttgtcagatctttattagaagaattcatcttgattagctatctatctcctagtagaa 60
||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| | ||
Sbjct: 4372 atcttatcagatctttattagaagaatccatcttgattagctatatatctcctagaataa 4431
Query: 61 ttagatgcacctggtgtctgtagatctgatccctactaattagtagattagatctgagta 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4432 ttagatgcacctggtgtctgtagatctgattcctactaattagtagattagatctgagta 4491
Query: 121 ctggtttatatactttgctatgtgtcagtgacacaaaactatcattaaccgcctattata 180
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4492 ctggtttatatactttgttatgtgtcagtgacacaaaactattattaaccgcctattata 4551
Query: 181 ttggtatcacccggtcatgcattatgactagttccaac 218
||||||| ||||||||||| ||||||||||||||||||
Sbjct: 4552 ttggtattacccggtcatgaattatgactagttccaac 4589
>3x_Contig1722
Length = 17718
Score = 337 bits (170), Expect = 2e-92
Identities = 206/218 (94%)
Strand = Plus / Minus
Query: 1 atcttgtcagatctttattagaagaattcatcttgattagctatctatctcctagtagaa 60
||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| | ||
Sbjct: 2427 atcttatcagatctttattagaagaatccatcttgattagctatatatctcctagaataa 2368
Query: 61 ttagatgcacctggtgtctgtagatctgatccctactaattagtagattagatctgagta 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2367 ttagatgcacctggtgtctgtagatctgattcctactaattagtagattagatctgagta 2308
Query: 121 ctggtttatatactttgctatgtgtcagtgacacaaaactatcattaaccgcctattata 180
||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||
Sbjct: 2307 ctggtttatatactttgttatgtgtcagtgacacaaaaccattattaaccgcctattata 2248
Query: 181 ttggtatcacccggtcatgcattatgactagttccaac 218
|| |||| |||||||||||| |||||||||||||||||
Sbjct: 2247 tttgtattacccggtcatgcgttatgactagttccaac 2210
>3x_Contig939
Length = 3877
Score = 272 bits (137), Expect = 1e-72
Identities = 179/192 (93%), Gaps = 2/192 (1%)
Strand = Plus / Plus
Query: 1 atcttgtcagatctttattagaagaattcatcttgattagctatctatctcctagtagaa 60
||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||
Sbjct: 2293 atcttgtcagatctttattagaagaatccatcttgattagctatatatatcctagtagaa 2352
Query: 61 ttagatgcacctggtgtctgtagatctgatccctactaattagtagattagatctgagta 120
||||||||||||||||||| ||||||| |||||||||||||| || ||| |||||||||
Sbjct: 2353 ttagatgcacctggtgtctctagatct--tccctactaattagcaggttatatctgagta 2410
Query: 121 ctggtttatatactttgctatgtgtcagtgacacaaaactatcattaaccgcctattata 180
||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 2411 ctggtttatatactttgttatgtgtcagtaacacaaaactattattaaccgcctattata 2470
Query: 181 ttggtatcaccc 192
||||||| ||||
Sbjct: 2471 ttggtattaccc 2482
>3x_Contig1675
Length = 13954
Score = 266 bits (134), Expect = 7e-71
Identities = 197/218 (90%)
Strand = Plus / Plus
Query: 1 atcttgtcagatctttattagaagaattcatcttgattagctatctatctcctagtagaa 60
||||| ||||||||||||||||||||| ||||||||| |||||| || ||||||||||||
Sbjct: 4178 atcttatcagatctttattagaagaatccatcttgatcagctatatacctcctagtagaa 4237
Query: 61 ttagatgcacctggtgtctgtagatctgatccctactaattagtagattagatctgagta 120
||||||| ||||||||||| |||| | || |||| ||| ||||||||||||||||||||
Sbjct: 4238 ttagatgtacctggtgtctctagacccaattcctaataactagtagattagatctgagta 4297
Query: 121 ctggtttatatactttgctatgtgtcagtgacacaaaactatcattaaccgcctattata 180
||||||| ||||||||| ||||||||||||| |||||||||| ||||| ||||||||| |
Sbjct: 4298 ctggtttgtatactttgttatgtgtcagtgatacaaaactattattaaacgcctattaca 4357
Query: 181 ttggtatcacccggtcatgcattatgactagttccaac 218
||||||| | ||||||||||||||||||||||||||||
Sbjct: 4358 ttggtattatccggtcatgcattatgactagttccaac 4395
>3x_Contig1747
Length = 15671
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 285 atccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2463 atccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 2404
Query: 345 ccccgtcgcggag 357
|||||||||||||
Sbjct: 2403 ccccgtcgcggag 2391
>3x_Contig1718
Length = 19496
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 285 atccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4333 atccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 4274
Query: 345 ccccgtcgcggag 357
|||||||||||||
Sbjct: 4273 ccccgtcgcggag 4261
>3x_Contig1376
Length = 7449
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 286 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6411 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 6470
Query: 346 cccgtcgcggagt 358
|||||||||||||
Sbjct: 6471 cccgtcgcggagt 6483
>3x_Contig1204
Length = 5869
Score = 143 bits (72), Expect = 7e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 286 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5718 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 5777
Query: 346 cccgtcgcggag 357
||||||||||||
Sbjct: 5778 cccgtcgcggag 5789
>3x_Contig1088
Length = 4585
Score = 143 bits (72), Expect = 7e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 286 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1499
Query: 346 cccgtcgcggag 357
||||||||||||
Sbjct: 1500 cccgtcgcggag 1511
>3x_Contig727
Length = 2486
Score = 143 bits (72), Expect = 7e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 286 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1114
Query: 346 cccgtcgcggag 357
||||||||||||
Sbjct: 1113 cccgtcgcggag 1102
>3x_Contig582
Length = 2827
Score = 143 bits (72), Expect = 7e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 286 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1773
Query: 346 cccgtcgcggag 357
||||||||||||
Sbjct: 1774 cccgtcgcggag 1785
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6406
Number of Sequences: 1807
Number of extensions: 6406
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 13
length of query: 1062
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1046
effective length of database: 10,329,639
effective search space: 10804802394
effective search space used: 10804802394
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)